GutPath

GutPath

A single cell and spatially resolved atlas of gene expression in the intestine during infection and inflammation

lymph node CITE-seq

lymph node CITE-seq

Over 180,000 cells from the messenteric lymph node draining the distal small intestine of mice

ileum CITE-seq

ileum CITE-seq

Over 320,000 cells from the epithelium and lamina propria of the distal small intestine of mice

lymph node CITE-seq (expanded)

lymph node CITE-seq (expanded)

Same dataset as immediately above, but expanded to include over 260,000 cells

ileum CITE-seq (expanded)

ileum CITE-seq (expanded)

Same dataset as immediately above, but expanded to include over 450,000 cells

ileum spatial

ileum spatial

Over 1.7M cells from the ileum and duodenum of mice

Colon spatial

Colon spatial

Over 333,000 cells from the large intestine of mice